Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_000078Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
CCR75_004036
CTLH domain-containing protein.
  
 
 0.980
CCR75_004680
Uncharacterized protein.
  
 
 0.980
CCR75_006865
SPRY domain-containing protein.
   
 0.898
CCR75_009794
SPRY domain-containing protein.
   
 0.898
CCR75_001535
PRA1 family protein.
    
 0.818
CCR75_009512
Protein yippee-like; Belongs to the yippee family.
  
 
 0.766
CCR75_007041
Protein yippee-like; Belongs to the yippee family.
  
 
 0.765
CCR75_006274
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
 0.732
CCR75_009552
FBPase domain-containing protein; Belongs to the FBPase class 1 family.
    
 
 0.679
CCR75_007388
SF4 helicase domain-containing protein.
    
   0.580
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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