Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_002313Uncharacterized protein. (782 aa)    
Predicted Functional Partners:
CCR75_009587
Uncharacterized protein.
    
 0.998
CCR75_001376
Uncharacterized protein.
   
 0.995
CCR75_007536
Uncharacterized protein.
    
 0.995
CCR75_004593
Uncharacterized protein.
    
 0.995
CCR75_006756
Uncharacterized protein.
    
 0.992
CCR75_003862
Uncharacterized protein.
     
 0.988
CCR75_005009
Uncharacterized protein.
   
 0.974
CCR75_005008
NOT2_3_5 domain-containing protein.
   
 0.974
CCR75_007882
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.932
CCR75_000166
Nascent polypeptide-associated complex subunit beta.
    
 0.874
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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