STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_009544Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. (215 aa)    
Predicted Functional Partners:
CCR75_008431
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
    0.556
CCR75_007879
Prohibitin.
    
 
 0.516
CCR75_009220
Prohibitin.
    
 
 0.515
CCR75_004235
zf-Tim10_DDP domain-containing protein.
   
 
 0.475
CCR75_007795
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.461
CCR75_008428
Mitochondrial inner membrane protease subunit.
    
 
 0.460
CCR75_007201
PUM-HD domain-containing protein.
    
   0.410
CCR75_005097
Uncharacterized protein.
   
 
 0.402
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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