Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_003431HECT domain-containing protein. (683 aa)    
Predicted Functional Partners:
CCR75_001812
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.817
CCR75_008671
Ubiquitin-like domain-containing protein.
    
 0.704
CCR75_001778
tRNA-binding domain-containing protein.
    
   0.678
CCR75_006831
Uncharacterized protein.
   
   0.644
CCR75_006485
Uncharacterized protein.
   
   0.644
CCR75_001386
RRM domain-containing protein.
    
 
 0.632
CCR75_007708
NAC-A/B domain-containing protein.
    
  0.624
CCR75_006777
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.590
CCR75_002377
Ubiquitin-like domain-containing protein.
    
  0.570
CCR75_001646
Ubiquitin-like domain-containing protein.
    
  0.570
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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