Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_003690Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
CCR75_003249
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.873
CCR75_003172
Uncharacterized protein.
    
 0.873
CCR75_008382
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.873
CCR75_008041
Uncharacterized protein.
    
 
 0.853
CCR75_004765
SANT domain-containing protein.
    
 0.759
CCR75_001261
Uncharacterized protein.
    
 0.712
CCR75_005337
Uncharacterized protein.
    
  0.678
CCR75_004975
VEFS-Box domain-containing protein.
     
 0.646
CCR75_000369
RING-type domain-containing protein.
     
  0.642
CCR75_007929
SAP domain-containing protein.
      
 0.494
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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