Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_001040Uncharacterized protein. (230 aa)    
Predicted Functional Partners:
CCR75_003709
Uncharacterized protein.
    
   0.589
CCR75_001582
tRNA_int_endo domain-containing protein.
      
 0.535
CCR75_009567
tRNA_int_endo domain-containing protein.
      
 0.516
CCR75_005431
Acetyl-coenzyme A synthetase.
     
 0.512
CCR75_001447
Uncharacterized protein.
     
 0.512
CCR75_001673
Uncharacterized protein.
      
 0.493
CCR75_006411
SAM_MT_TRM5_TYW2 domain-containing protein.
   
  
 0.480
CCR75_008415
Flavodoxin-like domain-containing protein.
   
  
 0.470
CCR75_001775
WD_REPEATS_REGION domain-containing protein.
      
 0.457
CCR75_006758
Tr-type G domain-containing protein.
   
  
 0.454
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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