CCR75_004450 protein (Bremia lactucae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

CCR75_004450

CSN8_PSD8_EIF3K domain-containing protein. (264 aa)

Predicted Functional Partners:

CCR75_006652

0.999

CCR75_004057

0.999

CCR75_005776

0.999

CCR75_005661

0.999

CCR75_004583

0.999

CCR75_008209

0.999

CCR75_005718

0.999

CCR75_003663

0.999

CCR75_007628

0.998

CCR75_007144

0.998

Your Current Organism:

Bremia lactucae

NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCR75_003663	CCR75_004057	A0A484EDV8	A0A484DTB4	Uncharacterized protein.	MPN domain-containing protein.	0.998
CCR75_003663	CCR75_004450	A0A484EDV8	A0A484ECF5	Uncharacterized protein.	CSN8_PSD8_EIF3K domain-containing protein.	0.999
CCR75_003663	CCR75_004583	A0A484EDV8	A0A484E2E6	Uncharacterized protein.	PCI domain-containing protein.	0.999
CCR75_003663	CCR75_005661	A0A484EDV8	A0A484E0Z0	Uncharacterized protein.	VWFA domain-containing protein.	0.999
CCR75_003663	CCR75_005718	A0A484EDV8	A0A484ECZ9	Uncharacterized protein.	RPN2_C domain-containing protein; Belongs to the proteasome subunit S1 family.	0.999
CCR75_003663	CCR75_005776	A0A484EDV8	A0A484DW64	Uncharacterized protein.	PCI domain-containing protein.	0.999
CCR75_003663	CCR75_006652	A0A484EDV8	A0A484DSC6	Uncharacterized protein.	Uncharacterized protein.	0.999
CCR75_003663	CCR75_007144	A0A484EDV8	A0A484DZ62	Uncharacterized protein.	Uncharacterized protein.	0.998
CCR75_003663	CCR75_007628	A0A484EDV8	A0A484DT20	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.997
CCR75_003663	CCR75_008209	A0A484EDV8	A0A484E6Y0	Uncharacterized protein.	PCI domain-containing protein.	0.999
CCR75_004057	CCR75_003663	A0A484DTB4	A0A484EDV8	MPN domain-containing protein.	Uncharacterized protein.	0.998
CCR75_004057	CCR75_004450	A0A484DTB4	A0A484ECF5	MPN domain-containing protein.	CSN8_PSD8_EIF3K domain-containing protein.	0.999
CCR75_004057	CCR75_004583	A0A484DTB4	A0A484E2E6	MPN domain-containing protein.	PCI domain-containing protein.	0.999
CCR75_004057	CCR75_005661	A0A484DTB4	A0A484E0Z0	MPN domain-containing protein.	VWFA domain-containing protein.	0.999
CCR75_004057	CCR75_005718	A0A484DTB4	A0A484ECZ9	MPN domain-containing protein.	RPN2_C domain-containing protein; Belongs to the proteasome subunit S1 family.	0.999
CCR75_004057	CCR75_005776	A0A484DTB4	A0A484DW64	MPN domain-containing protein.	PCI domain-containing protein.	0.999
CCR75_004057	CCR75_006652	A0A484DTB4	A0A484DSC6	MPN domain-containing protein.	Uncharacterized protein.	0.999
CCR75_004057	CCR75_007144	A0A484DTB4	A0A484DZ62	MPN domain-containing protein.	Uncharacterized protein.	0.998
CCR75_004057	CCR75_007628	A0A484DTB4	A0A484DT20	MPN domain-containing protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.998
CCR75_004057	CCR75_008209	A0A484DTB4	A0A484E6Y0	MPN domain-containing protein.	PCI domain-containing protein.	0.999