STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_003412Uncharacterized protein. (298 aa)    
Predicted Functional Partners:
CCR75_003427
RING-type domain-containing protein.
    
  0.932
CCR75_004153
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.875
CCR75_000460
Uncharacterized protein.
    
 0.875
CCR75_005095
Uncharacterized protein.
    
 0.875
CCR75_003233
Lipase_3 domain-containing protein.
    
 0.855
CCR75_005830
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.855
CCR75_001081
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.855
CCR75_001812
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.610
CCR75_003151
TIP120 domain-containing protein.
     
  0.610
CCR75_004734
Serine/threonine-protein phosphatase.
    
   0.563
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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