STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_003282DUF4110 domain-containing protein. (682 aa)    
Predicted Functional Partners:
CCR75_004570
KH domain-containing protein.
   
   0.876
CCR75_000984
Uncharacterized protein.
    
   0.853
CCR75_005790
CBF domain-containing protein.
   
    0.603
CCR75_004142
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
   0.596
CCR75_006585
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
    
   0.590
CCR75_004216
Uncharacterized protein.
   
    0.585
CCR75_000721
Brix domain-containing protein.
   
    0.552
CCR75_004889
Uncharacterized protein.
   
    0.547
CCR75_001678
Bms1-type G domain-containing protein.
   
    0.523
CCR75_008803
WD_REPEATS_REGION domain-containing protein.
   
    0.519
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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