STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_009457CBM20 domain-containing protein. (1160 aa)    
Predicted Functional Partners:
CCR75_004303
DIX domain-containing protein.
     
 0.970
CCR75_008944
Trehalase.
   
 0.910
CCR75_002089
Trehalase.
   
 0.910
CCR75_005974
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.903
CCR75_001825
CBM20 domain-containing protein.
  
  
 
0.886
CCR75_005350
Uncharacterized protein.
  
  
 
0.861
CCR75_000455
Glyco_transf_20 domain-containing protein.
  
  
 
0.860
CCR75_006666
Glyco_transf_20 domain-containing protein.
  
  
 
0.854
CCR75_003074
NAD(P)-bd_dom domain-containing protein.
     
 0.840
CCR75_002022
Uncharacterized protein.
    
 0.835
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.