Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_009579SUI1 domain-containing protein. (468 aa)    
Predicted Functional Partners:
CCR75_000017
Uncharacterized protein.
   
   0.694
CCR75_006984
Uncharacterized protein.
    
   0.687
CCR75_004102
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
   0.648
CCR75_009628
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
   0.641
CCR75_006886
PUA domain-containing protein.
    
 
 0.635
CCR75_008270
Uncharacterized protein.
    
   0.627
CCR75_005197
WD_REPEATS_REGION domain-containing protein.
    
   0.618
CCR75_008672
WD_REPEATS_REGION domain-containing protein.
    
   0.618
CCR75_005230
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
    
   0.590
CCR75_004850
Uncharacterized protein.
    
   0.590
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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