STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_005255Uncharacterized protein. (185 aa)    
Predicted Functional Partners:
CCR75_001812
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.702
CCR75_000654
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.682
CCR75_004467
Uncharacterized protein.
    
 0.678
CCR75_000237
Bms1-type G domain-containing protein.
   
  0.674
CCR75_004686
Uncharacterized protein.
   
 0.668
CCR75_005158
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.662
CCR75_004102
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.662
CCR75_004570
KH domain-containing protein.
   
  0.662
CCR75_000653
Histone H3; Belongs to the histone H3 family.
   
 0.661
CCR75_006391
Histone H3; Belongs to the histone H3 family.
   
 0.661
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
Server load: medium (70%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.