CCR75_007419 protein (Bremia lactucae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

CCR75_007419

BPL/LPL catalytic domain-containing protein. (316 aa)

Predicted Functional Partners:

CCR75_002663

0.956

CCR75_000788

0.945

CCR75_003495

0.774

CCR75_000627

0.655

CCR75_006933

0.655

CCR75_008872

0.655

CCR75_008649

0.650

CCR75_006193

0.645

CCR75_005477

0.645

CCR75_001174

0.645

Your Current Organism:

Bremia lactucae

NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCR75_000627	CCR75_003495	A0A484DQL6	A0A484EA24	Flavoprotein domain-containing protein.	Uncharacterized protein.	0.501
CCR75_000627	CCR75_006933	A0A484DQL6	A0A484DXH7	Flavoprotein domain-containing protein.	DFP domain-containing protein.	0.842
CCR75_000627	CCR75_007419	A0A484DQL6	A0A484EEP6	Flavoprotein domain-containing protein.	BPL/LPL catalytic domain-containing protein.	0.655
CCR75_000627	CCR75_008872	A0A484DQL6	A0A484E7Z2	Flavoprotein domain-containing protein.	Lipase_3 domain-containing protein.	0.842
CCR75_000788	CCR75_001174	A0A484EB50	A0A484EHW9	Uncharacterized protein.	Uncharacterized protein.	0.684
CCR75_000788	CCR75_002663	A0A484EB50	A0A484EC98	Uncharacterized protein.	Uncharacterized protein.	0.749
CCR75_000788	CCR75_005477	A0A484EB50	A0A484EF91	Uncharacterized protein.	Uncharacterized protein.	0.684
CCR75_000788	CCR75_006193	A0A484EB50	A0A484DX70	Uncharacterized protein.	Uncharacterized protein.	0.684
CCR75_000788	CCR75_007419	A0A484EB50	A0A484EEP6	Uncharacterized protein.	BPL/LPL catalytic domain-containing protein.	0.945
CCR75_000788	CCR75_008649	A0A484EB50	A0A484DRJ5	Uncharacterized protein.	Uncharacterized protein.	0.591
CCR75_001174	CCR75_000788	A0A484EHW9	A0A484EB50	Uncharacterized protein.	Uncharacterized protein.	0.684
CCR75_001174	CCR75_002663	A0A484EHW9	A0A484EC98	Uncharacterized protein.	Uncharacterized protein.	0.645
CCR75_001174	CCR75_007419	A0A484EHW9	A0A484EEP6	Uncharacterized protein.	BPL/LPL catalytic domain-containing protein.	0.645
CCR75_001174	CCR75_008649	A0A484EHW9	A0A484DRJ5	Uncharacterized protein.	Uncharacterized protein.	0.608
CCR75_002663	CCR75_000788	A0A484EC98	A0A484EB50	Uncharacterized protein.	Uncharacterized protein.	0.749
CCR75_002663	CCR75_001174	A0A484EC98	A0A484EHW9	Uncharacterized protein.	Uncharacterized protein.	0.645
CCR75_002663	CCR75_005477	A0A484EC98	A0A484EF91	Uncharacterized protein.	Uncharacterized protein.	0.645
CCR75_002663	CCR75_006193	A0A484EC98	A0A484DX70	Uncharacterized protein.	Uncharacterized protein.	0.645
CCR75_002663	CCR75_007419	A0A484EC98	A0A484EEP6	Uncharacterized protein.	BPL/LPL catalytic domain-containing protein.	0.956
CCR75_003495	CCR75_000627	A0A484EA24	A0A484DQL6	Uncharacterized protein.	Flavoprotein domain-containing protein.	0.501