STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCR75_008085Uncharacterized protein. (441 aa)    
Predicted Functional Partners:
CCR75_001812
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.794
CCR75_003055
Nuclear cap-binding protein subunit 2.
    
 0.683
CCR75_004142
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.682
CCR75_002823
Uncharacterized protein.
    
 0.676
CCR75_004052
Tr-type G domain-containing protein.
   
 0.674
CCR75_007146
RRM domain-containing protein.
    
 0.671
CCR75_000984
Uncharacterized protein.
    
 0.671
CCR75_003098
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.671
CCR75_005645
RRM domain-containing protein.
    
 0.664
CCR75_004435
S1 motif domain-containing protein.
   
 0.660
Your Current Organism:
Bremia lactucae
NCBI taxonomy Id: 4779
Other names: B. lactucae, Bremia lactucae Regel, lettuce downy mildew
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