STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daud_0060KEGG: sth:STH3245 hypothetical protein. (253 aa)    
Predicted Functional Partners:
Daud_0059
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: chy:CHY_0189 transcriptional regulator, GntR family.
       0.800
Daud_1511
KEGG: chy:CHY_0303 hypothetical protein.
 
     0.783
Daud_0129
PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: chy:CHY_2367 hypothetical protein.
 
     0.779
Daud_1177
PFAM: protein of unknown function DUF1614; KEGG: chy:CHY_1924 hypothetical protein.
  
     0.738
Daud_1894
Molybdenum cofactor synthesis domain; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
  
 
 0.660
mobA
Molybdopterin-guanine dinucleotide biosynthesis protein B; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
  
 
 0.648
Daud_1176
PFAM: Stage II sporulation P family protein; KEGG: chy:CHY_1923 putative stage II sporulation protein P.
  
     0.648
ispE
4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
       0.598
Daud_2066
KEGG: mta:Moth_0580 hypothetical protein.
  
     0.591
Daud_1018
KEGG: mta:Moth_1522 protein of unknown function DUF322.
  
     0.588
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.