STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daud_0135PFAM: Aldehyde ferredoxin oxidoreductase-like; KEGG: mac:MA2962 aldehyde ferredoxin oxidoreductase. (578 aa)    
Predicted Functional Partners:
Daud_0134
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mac:MA2963 iron-sulfur cluster binding protein.
 
 
 0.983
Daud_0279
PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; KEGG: gme:Gmet_1045 aldehyde ferredoxin oxidoreductase.
  
  
 
0.928
Daud_1894
Molybdenum cofactor synthesis domain; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.778
Daud_1579
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sth:STH2600 formate dehydrogenase beta subunit.
  
 
 0.680
Daud_0369
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: shm:Shewmr7_0098 formate dehydrogenase, beta subunit.
  
 
 0.677
Daud_1043
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sth:STH2600 formate dehydrogenase beta subunit.
  
 
 0.677
Daud_1542
PFAM: extracellular solute-binding protein, family 1; KEGG: csa:Csal_2084 molybdate-binding protein.
 
   
 0.628
Daud_0136
Hypothetical protein.
       0.559
Daud_1895
Molybdenum cofactor synthesis domain; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.489
Daud_1541
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: swo:Swol_1632 sulfate/tungstate uptake family ABC transporter, permease protein.
 
     0.475
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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