Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Daud_0803KEGG: pai:PAE0243 ATP-dependent protease La. (485 aa)    
Predicted Functional Partners:
Daud_0800
KEGG: fnu:FN0446 hypothetical protein.
 
     0.917
Daud_1297
PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: mta:Moth_0886 hypothetical protein.
  
    0.814
Daud_1672
Superfamily I DNA and RNA helicases and helicase subunits-like protein; KEGG: fal:FRAAL2455 hypothetical protein.
  
    0.814
Daud_0799
Phosphoadenosine phosphosulfate reductase; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; phosphoadenosine phosphosulfate reductase; KEGG: pai:PAE1989 hypothetical protein.
 
     0.810
Daud_0802
Hypothetical protein.
       0.803
Daud_0801
Hypothetical protein.
       0.671
Daud_0539
Hypothetical protein; KEGG: mba:Mbar_A1016 type I restriction-modification system methyltransferase subunit.
  
    0.427
Daud_0772
Hypothetical protein; KEGG: fra:Francci3_0192 N-6 DNA methylase.
  
    0.427
Daud_0804
Hypothetical protein.
       0.422
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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