STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daud_1000KEGG: chy:CHY_0641 hypothetical protein. (233 aa)    
Predicted Functional Partners:
Daud_0999
PFAM: Fimbrial assembly family protein.
  
 
 0.927
Daud_0998
TIGRFAM: type IV pilus assembly protein PilM; KEGG: chy:CHY_0639 type IV pilus assembly protein PilM.
  
 
 0.858
Daud_0976
PFAM: Fimbrial assembly family protein; KEGG: chy:CHY_0640 type IV pilus assembly protein PilN.
  
 
 0.733
Daud_0954
PFAM: Fimbrial assembly family protein.
  
 
 0.707
Daud_0997
Hypothetical protein.
  
  
 0.701
Daud_0992
PFAM: type II secretion system protein; KEGG: mta:Moth_1552 type II secretion system protein.
   
 
 0.689
Daud_0994
KEGG: mta:Moth_1549 N-terminal methylation.
  
  
 0.640
Daud_0995
Hypothetical protein.
  
  
 0.632
Daud_0993
Hypothetical protein; KEGG: chy:CHY_0633 general secretion pathway protein G.
  
  
 0.628
Daud_0996
Hypothetical protein.
       0.597
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.