STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daud_1039PFAM: glycosyl transferase, group 1; KEGG: mta:Moth_1934 glycosyl transferase, group 1. (413 aa)    
Predicted Functional Partners:
Daud_1045
PFAM: glycoside hydrolase, family 57; KEGG: mta:Moth_1915 glycoside hydrolase, family 57; Belongs to the glycosyl hydrolase 57 family.
 
 
 0.996
Daud_1040
PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: mta:Moth_1925 nucleotidyl transferase.
 
 
 0.928
Daud_2091
TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: chy:CHY_2582 UTP-glucose-1-phosphate uridylyltransferase.
    
 0.906
Daud_1655
PFAM: glycosyl transferase, family 20; KEGG: mta:Moth_1367 alpha,alpha-trehalose-phosphate synthase (UDP-forming).
    
 0.904
Daud_0866
KEGG: mta:Moth_1850 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77.
     
 0.903
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
     
 0.903
Daud_1046
KEGG: mta:Moth_1914 hypothetical protein.
  
     0.618
Daud_1163
KEGG: mta:Moth_1937 carbohydrate binding family 25.
  
     0.590
Daud_1703
PFAM: sugar transferase; KEGG: spt:SPA0789 undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.589
Daud_1688
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.478
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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