STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daud_1157KEGG: mta:Moth_0652 protein of unknown function DUF132. (146 aa)    
Predicted Functional Partners:
Daud_1156
KEGG: gvi:glr2235 hypothetical protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
       0.773
Daud_1158
PFAM: acylphosphatase; KEGG: pai:PAE1232 acylphosphatase, putative.
       0.773
Daud_1682
PFAM: protein of unknown function DUF433; KEGG: ava:Ava_4167 protein of unknown function DUF433.
  
   
 0.559
Daud_1159
PFAM: PP-loop domain protein; KEGG: tte:TTE0073 predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family.
       0.544
Daud_1154
PFAM: PHP C-terminal domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding, class 1; KEGG: ttj:TTHA1150 DNA polymerase beta family (X family).
       0.492
Daud_1155
PFAM: beta-lactamase domain protein; KEGG: gsu:GSU0397 metallo-beta-lactamase family protein.
       0.492
Daud_0768
PFAM: protein of unknown function UPF0150; KEGG: mta:Moth_0167 protein of unknown function UPF0150.
  
     0.433
Daud_0520
PFAM: protein of unknown function UPF0150; KEGG: mta:Moth_0167 protein of unknown function UPF0150.
  
     0.425
Daud_1153
KEGG: det:DET0821 hypothetical protein.
       0.405
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.