STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daud_1467PFAM: helix-hairpin-helix motif; DNA repair protein RadC; KEGG: mta:Moth_0536 DNA repair protein RadC; Belongs to the UPF0758 family. (230 aa)    
Predicted Functional Partners:
Daud_1468
Maf protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.962
Daud_1465
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.958
Daud_1466
TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: chy:CHY_0342 cell shape-determining protein MreB.
  
  
 0.875
Daud_1469
KEGG: swo:Swol_1644 hypothetical protein.
       0.817
Daud_1464
KEGG: swo:Swol_1639 hypothetical protein.
  
  
 0.802
Daud_2082
PFAM: phosphoribosyltransferase; KEGG: swo:Swol_0188 phosphoribosyltransferase.
 
    0.756
Daud_1463
Peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: chy:CHY_0345 peptidoglycan biosynthesis transpeptidase.
       0.739
cinA
TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: tte:TTE1375 predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA.
     
 0.702
Daud_0832
KEGG: ttj:TTHA0227 hypothetical protein.
  
  
 0.667
Daud_1470
PFAM: Endoribonuclease L-PSP; KEGG: sth:STH1785 hypothetical protein.
       0.616
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.