Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Daud_1663PFAM: lipopolysaccharide biosynthesis; KEGG: swo:Swol_1712 capsular polysaccharide biosynthesis protein-like protein. (445 aa)    
Predicted Functional Partners:
Daud_1662
KEGG: gka:GK3326 capsular polysaccharide biosynthesis protein.
 
 0.998
Daud_1719
PFAM: PHP C-terminal domain protein; KEGG: btk:BT9727_4957 phosphotyrosine-protein phosphatase (capsular polysaccharide biosynthesis).
 
 
 0.944
Daud_1703
PFAM: sugar transferase; KEGG: spt:SPA0789 undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.919
Daud_1664
PFAM: O-antigen polymerase; KEGG: swo:Swol_0127 hypothetical protein.
 
     0.862
Daud_0091
Conserved hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.657
Daud_2076
KEGG: chy:CHY_0042 hypothetical protein.
 
 
 0.578
Daud_2095
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: chy:CHY_2591 putative transcriptional regulator.
  
  
 0.528
Daud_0020
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mbu:Mbur_1591 polysaccharide biosynthesis protein CapD.
 
  
 0.500
vapC-4
PilT protein domain protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.449
Daud_1661
KEGG: lpn:lpg1661 hypothetical protein.
       0.416
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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