STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Daud_1670Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (80 aa)    
Predicted Functional Partners:
Daud_0406
PFAM: PilT protein domain protein; KEGG: syf:Synpcc7942_1203 hypothetical protein.
 
    0.781
Daud_1671
KEGG: rpb:RPB_4529 protein of unknown function DUF559.
       0.483
Daud_1672
Superfamily I DNA and RNA helicases and helicase subunits-like protein; KEGG: fal:FRAAL2455 hypothetical protein.
       0.483
Daud_1661
KEGG: lpn:lpg1661 hypothetical protein.
  
     0.423
Daud_0199
PFAM: type III restriction enzyme, res subunit; KEGG: bpe:BP3117 putative restriction endonuclease.
  
     0.421
Your Current Organism:
Desulforudis audaxviator
NCBI taxonomy Id: 477974
Other names: C. Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator MP104C, Candidatus Desulforudis audaxviator str. MP104C, Candidatus Desulforudis audaxviator strain MP104C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.