Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A7456_02615 | OBX84987.1 | A7456_02615 | A7456_02170 | Sulfite transporter TauE/SafE; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.629 |
| A7456_02615 | OBX85060.1 | A7456_02615 | A7456_02620 | Sulfite transporter TauE/SafE; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | NADH oxidoreductase (quinone) subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.999 |
| A7456_02615 | OBX87115.1 | A7456_02615 | A7456_08120 | Sulfite transporter TauE/SafE; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.627 |
| OBX83358.1 | OBX84987.1 | A7456_04790 | A7456_02170 | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.534 |
| OBX83358.1 | OBX87218.1 | A7456_04790 | A7456_08780 | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Derived by automated computational analysis using gene prediction method: Protein Homology. | ClpXP protease specificity-enhancing factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.695 |
| OBX84986.1 | OBX84987.1 | A7456_02165 | A7456_02170 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.737 |
| OBX84986.1 | argC | A7456_02165 | A7456_02175 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.531 |
| OBX84987.1 | A7456_02615 | A7456_02170 | A7456_02615 | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Sulfite transporter TauE/SafE; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.629 |
| OBX84987.1 | OBX83358.1 | A7456_02170 | A7456_04790 | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.534 |
| OBX84987.1 | OBX84986.1 | A7456_02170 | A7456_02165 | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.737 |
| OBX84987.1 | OBX85060.1 | A7456_02170 | A7456_02620 | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | NADH oxidoreductase (quinone) subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.575 |
| OBX84987.1 | OBX87115.1 | A7456_02170 | A7456_08120 | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.645 |
| OBX84987.1 | OBX87218.1 | A7456_02170 | A7456_08780 | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | ClpXP protease specificity-enhancing factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.462 |
| OBX84987.1 | OBX88473.1 | A7456_02170 | A7456_00805 | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.461 |
| OBX84987.1 | argC | A7456_02170 | A7456_02175 | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.512 |
| OBX84987.1 | dapE | A7456_02170 | A7456_03250 | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily. | 0.511 |
| OBX84987.1 | nth | A7456_02170 | A7456_05940 | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.515 |
| OBX85060.1 | A7456_02615 | A7456_02620 | A7456_02615 | NADH oxidoreductase (quinone) subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Sulfite transporter TauE/SafE; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| OBX85060.1 | OBX84987.1 | A7456_02620 | A7456_02170 | NADH oxidoreductase (quinone) subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Iron-sulfur protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily. | 0.575 |
| OBX85060.1 | OBX87115.1 | A7456_02620 | A7456_08120 | NADH oxidoreductase (quinone) subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.722 |
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