Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OBX83512.1 | OBX83513.1 | A7456_05750 | A7456_05755 | L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.447 |
| OBX83513.1 | OBX83512.1 | A7456_05755 | A7456_05750 | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.447 |
| OBX83513.1 | OBX83514.1 | A7456_05755 | A7456_05760 | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.461 |
| OBX83513.1 | dksA | A7456_05755 | A7456_06815 | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | 0.445 |
| OBX83513.1 | mrdA | A7456_05755 | A7456_08680 | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.451 |
| OBX83514.1 | OBX83513.1 | A7456_05760 | A7456_05755 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.461 |
| dksA | OBX83513.1 | A7456_06815 | A7456_05755 | RNA polymerase-binding protein DksA; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression. | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.445 |
| mrdA | OBX83513.1 | A7456_08680 | A7456_05755 | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.451 |