STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0N7L4M7Atp-binding cassette superfamily. (622 aa)    
Predicted Functional Partners:
A0A0N7L557
Animal inward rectifier k channel (Irk-c) family protein.
   
 0.732
A0A0P1B2K8
Animal inward rectifier k channel (Irk-c) family protein.
   
 0.732
A0A0P1B7L9
Animal inward rectifier k channel (Irk-c) family protein.
   
 0.732
A0A0P1AAC2
Atp-binding cassette superfamily.
    
0.708
A0A0P1AFQ9
Calreticulin.
   
 0.662
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.656
A0A0N7L8D6
Uncharacterized protein.
    
  0.629
A0A0P1B4I0
Protein disulfide-isomerase.
    
  0.629
A0A0P1AZ33
Atp-binding cassette superfamily.
  
0.597
A0A0P1A9I1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.576
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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