STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1A5K2Vacuolar protein sorting-associating; Belongs to the AAA ATPase family. (460 aa)    
Predicted Functional Partners:
A0A0P1AG58
Hydroxyproline-rich glycoprotein.
   
 0.998
A0A0P1AN92
Hydroxymethylglutaryl-mitochondrial.
    
 0.994
A0A0P1AS18
Snf7-domain-containing protein.
    
 0.994
A0A0P1AWN4
Snf7 family protein.
   
 0.994
A0A0P1A6A2
Snf7 family protein.
    
 0.991
A0A0P1AHC7
Spindle pole body protein.
   
 0.983
A0A0P1AZB1
Chromatin modifying protein 5.
   
 0.972
A0A0P1ASU0
MutL_C domain-containing protein.
    
   0.864
A0A0P1A6M5
Predicted signal transduction protein.
    
 0.806
A0A0P1AB81
Ubiquitin-40s ribosomal protein s27a.
   
  0.649
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.