STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1ADE8annotation not available (232 aa)    
Predicted Functional Partners:
A0A0P1B396
Dead deah box rna.
    
  0.831
A0A0P1ADR6
Retrotransposon unclassified.
  
     0.534
A0A0P1AJB2
annotation not available
  
     0.534
A0A0P1B4D5
Retrovirus-related pol polyprotein from transposon tnt 1-94.
  
     0.532
A0A0P1AQF0
Retrotransposon ty1-copia subclass.
  
     0.530
A0A0P1AE85
Gag-pol polyprotein.
  
     0.525
A0A0P1ABA7
annotation not available
  
     0.521
A0A0P1AZP2
Copia partial.
  
     0.521
A0A0P1AZF5
Polyprotein.
  
     0.520
A0A0P1B2C7
Retrotransposon ty1-copia subclass.
  
     0.520
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.