STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1AE29Cug-bp-and etr-3-like. (488 aa)    
Predicted Functional Partners:
A0A0P1AIA1
U1 snrnp 70k protein.
  
 
 
 0.551
A0A0P1B7E3
Heterogeneous nuclear ribonucleoprotein.
  
 
   0.523
A0A0P1A9I3
Uncharacterized protein.
      
 0.478
A0A0P1ACX6
Tryptophan beta subunit.
      
 0.478
A0A0P1AEZ7
Serine arginine-rich splicing factor 2-like isoform x1.
  
     0.469
A0A0P1AV91
Potassium sodium efflux P-type fungal-type; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
      
 0.468
A0A0P1AXP5
Rrna methylase family.
      
 0.468
A0A0P1AWF3
U11 u12 small nuclear ribonucleoprotein 35 kDa.
  
 
 
 0.453
A0A0P1A9U7
Rna binding protein.
  
     0.425
A0A0P1AK20
Tryptophan alpha subunit; Belongs to the TrpA family.
      
 0.424
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.