STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1AFT7FOG: TPR repeat. (787 aa)    
Predicted Functional Partners:
A0A0P1AA59
WD40 repeat-containing protein.
    
 0.801
A0A0P1ATT4
Bardet-biedl syndrome parathyroid hormone-responsive b1.
    
 0.794
A0A0P1AUY8
WD40/YVTN repeat-like-containing domain.
    
 0.785
A0A0P1AYN9
Bardet-biedl syndrome 5 protein homolog.
    
 0.775
A0A0P1ARD6
Trp protein for ciliary function.
    
  0.770
A0A0P1A6Y5
Bardet-biedl syndrome 2 protein homolog.
    
 0.752
A0A0P1AN33
IFT81_CH domain-containing protein.
    
 0.752
A0A0P1B6U7
Acyl-synthetase.
    
 0.752
A0A0P1AAI0
RNA polymerase II assessory factor Cdc73p.
    
 0.751
A0A0P1AR36
Anaphase-promoting complex (APC), Cdc16 subunit.
    
 0.750
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.