STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1AHI2Zinc finger domain containing protein. (340 aa)    
Predicted Functional Partners:
A0A0P1AZ06
Uncharacterized conserved protein.
   
 0.934
A0A0P1AQM3
Transcriptional regulator SNIP1, contains FHA domain.
   
 0.933
A0A0P1AH01
Uncharacterized conserved protein, contains CXXC motifs.
    
 
 0.831
A0A0N7L8G5
Splicing factor 3b, subunit 1.
    
 
 0.821
A0A0P1AL81
Splicing factor 3b subunit 2-like.
    
 
 0.806
A0A0P1AHM1
Cell division cycle 5-like protein.
    
 
 0.805
A0A0N7L587
Pre-mrna-splicing factor rse1.
    
 
 0.803
A0A0P1B4L6
Splicing factor 3b subunit 4-like.
    
 
 0.803
A0A0P1A4B3
Cyclin D-interacting protein GCIP.
    
 0.799
A0A0P1B552
mRNA splicing factor.
    
   0.778
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.