STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1AHU7Amino acid auxin permease family. (484 aa)    
Predicted Functional Partners:
A0A0P1ARW8
Uncharacterized protein.
    
 0.732
A0A0P1AP29
Ragulator complex protein lamtor2 isoform x1.
    
  0.573
A0A0P1A9P6
Ras-related gtp-binding protein.
    
 0.561
A0A0P1AXB3
Ras-related gtp-binding protein a.
   
 0.551
A0A0P1B641
Ras-related gtp-binding protein.
   
 0.551
A0A0P1APC0
Cmgc gsk protein kinase; Belongs to the protein kinase superfamily.
    
 0.539
A0A0P1AAB7
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
    
 0.516
A0A0P1A5K1
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
  0.511
A0A0P1A9P5
5 ampactivated protein kinase subunit beta.
    
  0.484
A0A0P1B201
G-protein beta subunit-like protein (Contains WD40 repeats).
    
  0.444
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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