STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1AP40Atp-dependent rna. (1513 aa)    
Predicted Functional Partners:
A0A0P1AXI9
Splicing factor 3a, subunit 1.
   
 0.992
A0A0P1ACL9
Clathrin-adaptor medium chain ap-2; Belongs to the adaptor complexes medium subunit family.
    
 0.862
A0A0P1AGR8
Rrna biogenesis protein rrp5.
  
 0.839
A0A0P1AFV2
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.829
A0A0P1AK42
U3 small nucleolar rna-associated protein 18.
   
 0.819
A0A0P1B6D4
mRNA splicing factor.
    
 0.819
A0A0N7L6V6
Nucleolar complex protein 4 homolog.
   
  0.817
A0A0P1A9L8
Disrupter of silencing SAS10.
   
 0.801
A0A0P1AGA1
Ap-2 complex subunit.
    
  0.800
A0A0P1AJZ0
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
  0.800
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.