STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1ARP460s ribosomal protein. (256 aa)    
Predicted Functional Partners:
A0A0N7L406
60s ribosomal protein l22.
   
 0.999
A0A0N7L408
60s ribosomal protein l27.
  
 0.999
A0A0N7L5R8
Ribosomal protein l7.
  
 0.999
A0A0N7L6Q0
60s ribosomal protein l9.
  
 0.999
A0A0N7L6R3
Ribosomal protein l29.
  
 0.999
A0A0N7L7F0
60s ribosomal protein l31.
   
 0.999
A0A0N7L7H5
60s ribosomal protein l34-b.
  
 0.999
A0A0N7L812
60s ribosomal protein l5.
  
 0.999
A0A0P1A4N7
Wee protein kinase.
  
 0.999
A0A0P1A8B7
60s ribosomal protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.