STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1ASE4Elongation factor p. (210 aa)    
Predicted Functional Partners:
A0A0P1A8W4
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.993
A0A0P1A6C7
40s ribosomal protein; Belongs to the universal ribosomal protein uS7 family.
  
 
 0.983
A0A0N7L8B9
40s ribosomal protein s18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.982
A0A0P1AA55
Archaeal ribosomal protein s17p.
   
 
 0.982
A0A0P1AKZ2
40s ribosomal protein s23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.982
A0A0N7L812
60s ribosomal protein l5.
   
 
 0.981
A0A0P1A880
40s ribosomal protein s20.
   
 
 0.981
A0A0P1B4R0
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.981
A0A0N7L6R3
Ribosomal protein l29.
   
 
 0.980
A0A0P1B3T9
40s ribosomal protein.
   
 
 0.980
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.