STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1AU55Atp-binding cassette superfamily; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily. (1296 aa)    
Predicted Functional Partners:
A0A0P1AXJ8
Tor signaling pathway regulator.
    
 0.562
A0A0N7L6F1
Serine/threonine-protein phosphatase.
    
 
 0.537
A0A0P1AI07
Phosphoesterase domain.
    
 
 0.537
A0A0P1ARW1
Serine/threonine-protein phosphatase.
    
 
 0.537
A0A0N7L5P5
Atp synthase gamma subunit.
   
   0.535
A0A0P1B004
Outer dynein arm light chain 2.
    
   0.530
A0A0N7L7P7
F0f1 atp synthase subunit alpha.
    
   0.522
A0A0N7LBK2
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
   0.522
A0A0P1ATQ2
Atp synthase subunit mitochondrial.
    
   0.510
A0A0P1A9B0
Atp synthase subunit mitochondrial-like.
    
   0.493
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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