Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0P1A6R4 | A0A0P1AIP0 | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | Ribosomal protein l7 l12. | 0.409 |
A0A0P1A6R4 | A0A0P1AVD3 | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.999 |
A0A0P1A6R4 | A0A0P1AXZ6 | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | Mitochondrial 2-oxoglutarate malate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.407 |
A0A0P1ABT6 | A0A0P1AXZ6 | Acetolactate synthase. | Mitochondrial 2-oxoglutarate malate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.512 |
A0A0P1AIP0 | A0A0P1A6R4 | Ribosomal protein l7 l12. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.409 |
A0A0P1AIP0 | A0A0P1AUJ9 | Ribosomal protein l7 l12. | Protein transporter sec61 subunit alpha isoform 2. | 0.897 |
A0A0P1AIP0 | A0A0P1AVD3 | Ribosomal protein l7 l12. | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | 0.521 |
A0A0P1AIP0 | A0A0P1AXZ6 | Ribosomal protein l7 l12. | Mitochondrial 2-oxoglutarate malate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.614 |
A0A0P1AUA7 | A0A0P1AUJ9 | Uncharacterized protein. | Protein transporter sec61 subunit alpha isoform 2. | 0.587 |
A0A0P1AUA7 | A0A0P1AXZ6 | Uncharacterized protein. | Mitochondrial 2-oxoglutarate malate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.534 |
A0A0P1AUJ9 | A0A0P1AIP0 | Protein transporter sec61 subunit alpha isoform 2. | Ribosomal protein l7 l12. | 0.897 |
A0A0P1AUJ9 | A0A0P1AUA7 | Protein transporter sec61 subunit alpha isoform 2. | Uncharacterized protein. | 0.587 |
A0A0P1AUJ9 | A0A0P1AXZ6 | Protein transporter sec61 subunit alpha isoform 2. | Mitochondrial 2-oxoglutarate malate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.550 |
A0A0P1AUJ9 | A0A0P1B1F9 | Protein transporter sec61 subunit alpha isoform 2. | Wnk protein kinase. | 0.587 |
A0A0P1AVD3 | A0A0P1A6R4 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.999 |
A0A0P1AVD3 | A0A0P1AIP0 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | Ribosomal protein l7 l12. | 0.521 |
A0A0P1AVD3 | A0A0P1AXZ6 | Ubiquinol-cytochrome c reductase cytochrome c1 subunit. | Mitochondrial 2-oxoglutarate malate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.404 |
A0A0P1AXZ6 | A0A0P1A6R4 | Mitochondrial 2-oxoglutarate malate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.407 |
A0A0P1AXZ6 | A0A0P1ABT6 | Mitochondrial 2-oxoglutarate malate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. | Acetolactate synthase. | 0.512 |
A0A0P1AXZ6 | A0A0P1AIP0 | Mitochondrial 2-oxoglutarate malate carrier; Belongs to the mitochondrial carrier (TC 2.A.29) family. | Ribosomal protein l7 l12. | 0.614 |
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