STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1AY31Rna binding. (196 aa)    
Predicted Functional Partners:
A0A0P1A8W4
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.819
A0A0P1B3L6
U1 small nuclear ribonucleoprotein a.
    
 0.782
A0A0N7L479
Nuclear cap-binding protein subunit 2.
    
 0.778
A0A0P1AD86
Nuclear cap-binding protein.
    
 0.774
A0A0P1A4C0
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.770
A0A0P1B1F8
Arginine serine-rich-splicing factor rsp40-like.
    
 0.769
A0A0P1ANL0
Ribosomal protein s6.
    
 0.760
A0A0P1A777
Eukaryotic translation initiation factor 2 subunit 3.
   
 0.759
A0A0P1AEZ7
Serine arginine-rich splicing factor 2-like isoform x1.
    
 0.752
A0A0P1AKB8
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.750
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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