STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1AZC2Uncharacterized protein. (443 aa)    
Predicted Functional Partners:
A0A0P1ACK4
Translation elongation factor aef-2.
    
 0.732
A0A0P1A9G7
B9 domain-containing protein 1.
    
 0.615
A0A0P1AML2
Protein containing a U1-type Zn-finger and implicated in RNA splicing or processing.
    
 0.611
A0A0P1AM59
C2 Ca2-binding motif-containing protein.
    
 0.604
A0A0P1ASI9
B9 domain.
    
 0.556
A0A0N7L3E1
Elongation factor tu gtp-binding domain-containing.
    
 0.550
A0A0N7L529
116 kDa u5 small nuclear ribonucleoprotein component-like.
    
 0.550
A0A0P1A998
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
    
 0.550
A0A0P1A4M6
B9 domain-containing protein 2.
    
 0.543
A0A0P1AJI6
Uncharacterized conserved protein.
    
 0.543
Your Current Organism:
Plasmopara halstedii
NCBI taxonomy Id: 4781
Other names: P. halstedii, Peronospora halstedii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.