Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO85712.1 | CDO85713.1 | BN973_00043 | BN973_00044 | UsfY protein. | Hydrolase. | 0.539 |
CDO85713.1 | CDO85712.1 | BN973_00044 | BN973_00043 | Hydrolase. | UsfY protein. | 0.539 |
CDO85713.1 | CDO87202.1 | BN973_00044 | BN973_01553 | Hydrolase. | Hydrolase. | 0.477 |
CDO85713.1 | CDO88868.1 | BN973_00044 | BN973_03238 | Hydrolase. | Competence damage-inducible protein A; Belongs to the CinA family. | 0.767 |
CDO85713.1 | CDO89529.1 | BN973_00044 | BN973_03906 | Hydrolase. | Hydrolase. | 0.517 |
CDO85713.1 | atpD | BN973_00044 | BN973_04320 | Hydrolase. | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.493 |
CDO85713.1 | atpG | BN973_00044 | BN973_04321 | Hydrolase. | F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.496 |
CDO85713.1 | atpH | BN973_00044 | BN973_04323 | Hydrolase. | F0F1 ATP synthase subunit delta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | 0.844 |
CDO85713.1 | guaA | BN973_00044 | BN973_01558 | Hydrolase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.737 |
CDO85713.1 | moaA | BN973_00044 | BN973_05129 | Hydrolase. | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.539 |
CDO85713.1 | pta | BN973_00044 | BN973_01064 | Hydrolase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.618 |
CDO87202.1 | CDO85713.1 | BN973_01553 | BN973_00044 | Hydrolase. | Hydrolase. | 0.477 |
CDO87202.1 | CDO88868.1 | BN973_01553 | BN973_03238 | Hydrolase. | Competence damage-inducible protein A; Belongs to the CinA family. | 0.762 |
CDO87202.1 | CDO89529.1 | BN973_01553 | BN973_03906 | Hydrolase. | Hydrolase. | 0.422 |
CDO87202.1 | guaA | BN973_01553 | BN973_01558 | Hydrolase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.889 |
CDO88868.1 | CDO85713.1 | BN973_03238 | BN973_00044 | Competence damage-inducible protein A; Belongs to the CinA family. | Hydrolase. | 0.767 |
CDO88868.1 | CDO87202.1 | BN973_03238 | BN973_01553 | Competence damage-inducible protein A; Belongs to the CinA family. | Hydrolase. | 0.762 |
CDO88868.1 | CDO89529.1 | BN973_03238 | BN973_03906 | Competence damage-inducible protein A; Belongs to the CinA family. | Hydrolase. | 0.762 |
CDO88868.1 | pta | BN973_03238 | BN973_01064 | Competence damage-inducible protein A; Belongs to the CinA family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.468 |
CDO89529.1 | CDO85713.1 | BN973_03906 | BN973_00044 | Hydrolase. | Hydrolase. | 0.517 |
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