STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO86126.1F420-dependent methylene-tetrahydromethanopterin reductase. (375 aa)    
Predicted Functional Partners:
CDO86123.1
Hypothetical protein.
 
     0.908
CDO86124.1
AP endonuclease, family protein 2.
 
    0.899
CDO86125.1
Sulfotransferase family protein.
 
     0.880
CDO86122.1
Alpha/beta hydrolase.
  
    0.788
CDO90116.1
Putative F420-dependent oxidoreductase,c family.
  
     0.759
CDO86121.1
Oxidoreductase.
 
    
0.728
CDO89451.1
F420-dependent methylene-tetrahydromethanopterin reductase.
  
     0.644
CDO90334.1
Luciferase family protein.
  
     0.644
CDO89453.1
Luciferase family protein.
  
     0.633
CDO85854.1
F420-dependent methylene-tetrahydromethanopterin reductase.
  
     0.618
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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