STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO86177.1Hypothetical protein. (257 aa)    
Predicted Functional Partners:
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.
  
  
 0.765
CDO86178.1
acyl-CoA thioesterase.
       0.746
CDO88873.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
   
 0.512
CDO88832.1
PPOX class F420-dependent protein.
  
    0.503
CDO88871.1
Membrane protein.
      
 0.463
CDO86745.1
Alpha/beta hydrolase superfamily enzyme, hydrolase.
      
 0.461
CDO87846.1
OsmC family protein.
      
 0.461
CDO88488.1
Hypothetical protein.
  
     0.461
CDO87249.1
Putative integral membrane protein.
  
     0.433
CDO90510.1
Phospholipase, patatin family protein.
  
     0.409
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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