Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO86374.1 | CDO86376.1 | BN973_00717 | BN973_00719 | Hypothetical protein. | Sulfotransferase family protein. | 0.902 |
CDO86376.1 | CDO86374.1 | BN973_00719 | BN973_00717 | Sulfotransferase family protein. | Hypothetical protein. | 0.902 |
CDO86376.1 | CDO87739.1 | BN973_00719 | BN973_02095 | Sulfotransferase family protein. | Immunogenic protein MPB64/MPT64. | 0.813 |
CDO86376.1 | CDO89465.1 | BN973_00719 | BN973_03841 | Sulfotransferase family protein. | Hypothetical protein. | 0.793 |
CDO86376.1 | CDO89525.1 | BN973_00719 | BN973_03902 | Sulfotransferase family protein. | Immunogenic protein MPB64/MPT64. | 0.813 |
CDO86376.1 | alaS | BN973_00719 | BN973_02572 | Sulfotransferase family protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.900 |
CDO86376.1 | glnB | BN973_00719 | BN973_02209 | Sulfotransferase family protein. | Nitrogen regulatory protein P-II GLNB; Belongs to the P(II) protein family. | 0.783 |
CDO86376.1 | htpG | BN973_00719 | BN973_03863 | Sulfotransferase family protein. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.894 |
CDO86376.1 | rpoA | BN973_00719 | BN973_01450 | Sulfotransferase family protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.830 |
CDO86376.1 | rpoB | BN973_00719 | BN973_01334 | Sulfotransferase family protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.814 |
CDO86376.1 | rpoZ | BN973_00719 | BN973_02621 | Sulfotransferase family protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.808 |
CDO87739.1 | CDO86376.1 | BN973_02095 | BN973_00719 | Immunogenic protein MPB64/MPT64. | Sulfotransferase family protein. | 0.813 |
CDO87739.1 | alaS | BN973_02095 | BN973_02572 | Immunogenic protein MPB64/MPT64. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.979 |
CDO87739.1 | rpoA | BN973_02095 | BN973_01450 | Immunogenic protein MPB64/MPT64. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.913 |
CDO87739.1 | rpoB | BN973_02095 | BN973_01334 | Immunogenic protein MPB64/MPT64. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.851 |
CDO87739.1 | rpoZ | BN973_02095 | BN973_02621 | Immunogenic protein MPB64/MPT64. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.856 |
CDO89465.1 | CDO86376.1 | BN973_03841 | BN973_00719 | Hypothetical protein. | Sulfotransferase family protein. | 0.793 |
CDO89525.1 | CDO86376.1 | BN973_03902 | BN973_00719 | Immunogenic protein MPB64/MPT64. | Sulfotransferase family protein. | 0.813 |
CDO89525.1 | alaS | BN973_03902 | BN973_02572 | Immunogenic protein MPB64/MPT64. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.979 |
CDO89525.1 | rpoA | BN973_03902 | BN973_01450 | Immunogenic protein MPB64/MPT64. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.913 |
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