Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO86459.1 | CDO86460.1 | BN973_00802 | BN973_00803 | Carboxylate/amino acid/amine transporter. | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | 0.725 |
CDO86459.1 | CDO86606.1 | BN973_00802 | BN973_00950 | Carboxylate/amino acid/amine transporter. | Hypothetical protein. | 0.416 |
CDO86459.1 | CDO86919.1 | BN973_00802 | BN973_01266 | Carboxylate/amino acid/amine transporter. | grcC1; Belongs to the FPP/GGPP synthase family. | 0.403 |
CDO86459.1 | CDO88188.1 | BN973_00802 | BN973_02552 | Carboxylate/amino acid/amine transporter. | AIG2-like family protein. | 0.435 |
CDO86459.1 | CDO89012.1 | BN973_00802 | BN973_03383 | Carboxylate/amino acid/amine transporter. | Hypothetical protein. | 0.527 |
CDO86459.1 | CDO89268.1 | BN973_00802 | BN973_03642 | Carboxylate/amino acid/amine transporter. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.403 |
CDO86459.1 | pheT | BN973_00802 | BN973_02870 | Carboxylate/amino acid/amine transporter. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.654 |
CDO86459.1 | uppS_1 | BN973_00802 | BN973_03981 | Carboxylate/amino acid/amine transporter. | Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.418 |
CDO86459.1 | uppS_2 | BN973_00802 | BN973_04884 | Carboxylate/amino acid/amine transporter. | Short (C15) chain Z-isoprenyl diphosphate synthase, UppS; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.418 |
CDO86460.1 | CDO86459.1 | BN973_00803 | BN973_00802 | LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. | Carboxylate/amino acid/amine transporter. | 0.725 |
CDO86606.1 | CDO86459.1 | BN973_00950 | BN973_00802 | Hypothetical protein. | Carboxylate/amino acid/amine transporter. | 0.416 |
CDO86606.1 | CDO89012.1 | BN973_00950 | BN973_03383 | Hypothetical protein. | Hypothetical protein. | 0.745 |
CDO86919.1 | CDO86459.1 | BN973_01266 | BN973_00802 | grcC1; Belongs to the FPP/GGPP synthase family. | Carboxylate/amino acid/amine transporter. | 0.403 |
CDO86919.1 | CDO89268.1 | BN973_01266 | BN973_03642 | grcC1; Belongs to the FPP/GGPP synthase family. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.908 |
CDO86919.1 | uppS_1 | BN973_01266 | BN973_03981 | grcC1; Belongs to the FPP/GGPP synthase family. | Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.923 |
CDO86919.1 | uppS_2 | BN973_01266 | BN973_04884 | grcC1; Belongs to the FPP/GGPP synthase family. | Short (C15) chain Z-isoprenyl diphosphate synthase, UppS; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.920 |
CDO88188.1 | CDO86459.1 | BN973_02552 | BN973_00802 | AIG2-like family protein. | Carboxylate/amino acid/amine transporter. | 0.435 |
CDO89012.1 | CDO86459.1 | BN973_03383 | BN973_00802 | Hypothetical protein. | Carboxylate/amino acid/amine transporter. | 0.527 |
CDO89012.1 | CDO86606.1 | BN973_03383 | BN973_00950 | Hypothetical protein. | Hypothetical protein. | 0.745 |
CDO89268.1 | CDO86459.1 | BN973_03642 | BN973_00802 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Carboxylate/amino acid/amine transporter. | 0.403 |
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