Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO86522.1 | CDO89737.1 | BN973_00866 | BN973_04117 | Succinate-semialdehyde dehydrogenase. | Pyruvate synthase. | 0.900 |
CDO86522.1 | citA | BN973_00866 | BN973_05111 | Succinate-semialdehyde dehydrogenase. | Citrate synthase; Belongs to the citrate synthase family. | 0.910 |
CDO86522.1 | fumC | BN973_00866 | BN973_04871 | Succinate-semialdehyde dehydrogenase. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.899 |
CDO86522.1 | gabT | BN973_00866 | BN973_02535 | Succinate-semialdehyde dehydrogenase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.916 |
CDO86522.1 | gltA1 | BN973_00866 | BN973_04834 | Succinate-semialdehyde dehydrogenase. | Citrate synthase; Belongs to the citrate synthase family. | 0.914 |
CDO86522.1 | gltA2 | BN973_00866 | BN973_05109 | Succinate-semialdehyde dehydrogenase. | Citrate synthase; Belongs to the citrate synthase family. | 0.911 |
CDO86522.1 | mdh | BN973_00866 | BN973_04427 | Succinate-semialdehyde dehydrogenase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.892 |
CDO86522.1 | mqo | BN973_00866 | BN973_02281 | Succinate-semialdehyde dehydrogenase. | Malate:quinone oxidoreductase. | 0.892 |
CDO86522.1 | sdhA_1 | BN973_00866 | BN973_00885 | Succinate-semialdehyde dehydrogenase. | Succinate dehydrogenase flavoprotein subunit. | 0.897 |
CDO86522.1 | sdhA_2 | BN973_00866 | BN973_01618 | Succinate-semialdehyde dehydrogenase. | Succinate dehydrogenase. | 0.897 |
CDO89737.1 | CDO86522.1 | BN973_04117 | BN973_00866 | Pyruvate synthase. | Succinate-semialdehyde dehydrogenase. | 0.900 |
CDO89737.1 | citA | BN973_04117 | BN973_05111 | Pyruvate synthase. | Citrate synthase; Belongs to the citrate synthase family. | 0.910 |
CDO89737.1 | fumC | BN973_04117 | BN973_04871 | Pyruvate synthase. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.853 |
CDO89737.1 | gabT | BN973_04117 | BN973_02535 | Pyruvate synthase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.737 |
CDO89737.1 | gltA1 | BN973_04117 | BN973_04834 | Pyruvate synthase. | Citrate synthase; Belongs to the citrate synthase family. | 0.910 |
CDO89737.1 | gltA2 | BN973_04117 | BN973_05109 | Pyruvate synthase. | Citrate synthase; Belongs to the citrate synthase family. | 0.910 |
CDO89737.1 | mdh | BN973_04117 | BN973_04427 | Pyruvate synthase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.958 |
CDO89737.1 | sdhA_1 | BN973_04117 | BN973_00885 | Pyruvate synthase. | Succinate dehydrogenase flavoprotein subunit. | 0.874 |
CDO89737.1 | sdhA_2 | BN973_04117 | BN973_01618 | Pyruvate synthase. | Succinate dehydrogenase. | 0.874 |
citA | CDO86522.1 | BN973_05111 | BN973_00866 | Citrate synthase; Belongs to the citrate synthase family. | Succinate-semialdehyde dehydrogenase. | 0.910 |
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