Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO86540.1 | CDO86542.1 | BN973_00884 | BN973_00886 | Fumarate reductase iron-sulfur subunit. | Integral membrane protein. | 0.999 |
CDO86540.1 | CDO87267.1 | BN973_00884 | BN973_01619 | Fumarate reductase iron-sulfur subunit. | Succinate dehydrogenase hydrophobic membrane anchor protein SdhD. | 0.998 |
CDO86540.1 | CDO88238.1 | BN973_00884 | BN973_02602 | Fumarate reductase iron-sulfur subunit. | Putative oxidoreductase/HEAT repeat-containing protein. | 0.967 |
CDO86540.1 | CDO90031.1 | BN973_00884 | BN973_04422 | Fumarate reductase iron-sulfur subunit. | Alpha-ketoglutarate decarboxylase. | 0.977 |
CDO86540.1 | fumC | BN973_00884 | BN973_04871 | Fumarate reductase iron-sulfur subunit. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.974 |
CDO86540.1 | sdhA_1 | BN973_00884 | BN973_00885 | Fumarate reductase iron-sulfur subunit. | Succinate dehydrogenase flavoprotein subunit. | 0.999 |
CDO86540.1 | sdhA_2 | BN973_00884 | BN973_01618 | Fumarate reductase iron-sulfur subunit. | Succinate dehydrogenase. | 0.997 |
CDO86540.1 | sdhC | BN973_00884 | BN973_01620 | Fumarate reductase iron-sulfur subunit. | Succinate dehydrogenase cytochrome B-556 subunit. | 0.998 |
CDO86540.1 | sucC | BN973_00884 | BN973_05033 | Fumarate reductase iron-sulfur subunit. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.978 |
CDO86540.1 | sucD | BN973_00884 | BN973_05032 | Fumarate reductase iron-sulfur subunit. | succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.981 |
CDO86542.1 | CDO86540.1 | BN973_00886 | BN973_00884 | Integral membrane protein. | Fumarate reductase iron-sulfur subunit. | 0.999 |
CDO86542.1 | CDO87267.1 | BN973_00886 | BN973_01619 | Integral membrane protein. | Succinate dehydrogenase hydrophobic membrane anchor protein SdhD. | 0.459 |
CDO86542.1 | CDO88238.1 | BN973_00886 | BN973_02602 | Integral membrane protein. | Putative oxidoreductase/HEAT repeat-containing protein. | 0.630 |
CDO86542.1 | sdhA_1 | BN973_00886 | BN973_00885 | Integral membrane protein. | Succinate dehydrogenase flavoprotein subunit. | 0.997 |
CDO86542.1 | sdhA_2 | BN973_00886 | BN973_01618 | Integral membrane protein. | Succinate dehydrogenase. | 0.882 |
CDO86542.1 | sdhC | BN973_00886 | BN973_01620 | Integral membrane protein. | Succinate dehydrogenase cytochrome B-556 subunit. | 0.461 |
CDO87267.1 | CDO86540.1 | BN973_01619 | BN973_00884 | Succinate dehydrogenase hydrophobic membrane anchor protein SdhD. | Fumarate reductase iron-sulfur subunit. | 0.998 |
CDO87267.1 | CDO86542.1 | BN973_01619 | BN973_00886 | Succinate dehydrogenase hydrophobic membrane anchor protein SdhD. | Integral membrane protein. | 0.459 |
CDO87267.1 | CDO88238.1 | BN973_01619 | BN973_02602 | Succinate dehydrogenase hydrophobic membrane anchor protein SdhD. | Putative oxidoreductase/HEAT repeat-containing protein. | 0.959 |
CDO87267.1 | CDO90031.1 | BN973_01619 | BN973_04422 | Succinate dehydrogenase hydrophobic membrane anchor protein SdhD. | Alpha-ketoglutarate decarboxylase. | 0.955 |
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