STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO87128.1Hydrolase. (335 aa)    
Predicted Functional Partners:
CDO87130.1
Peptidase M22, glycoprotease.
 
   
 0.878
CDO87129.1
YjeE family ATPase.
       0.860
CDO87131.1
Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
       0.860
gcp
DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.860
mas_2
Multifunctional mycocerosic acid synthase membrane-associated MAS.
  
 0.828
ppsC
Phenolpthiocerol synthesis type-I polyketide synthase PpsC.
  
 0.828
CDO89681.1
Beta-ketoacyl synthase.
  
 0.828
ephE
Epoxide hydrolase EphE.
  
   
 0.771
fas
Fatty acid synthase Fas.
  
 
 0.761
CDO88515.1
RifB protein.
  
 0.753
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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