Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDO87128.1 | CDO87129.1 | BN973_01479 | BN973_01480 | Hydrolase. | YjeE family ATPase. | 0.860 |
CDO87128.1 | CDO87130.1 | BN973_01479 | BN973_01481 | Hydrolase. | Peptidase M22, glycoprotease. | 0.878 |
CDO87128.1 | CDO87131.1 | BN973_01479 | BN973_01482 | Hydrolase. | Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.860 |
CDO87128.1 | CDO88515.1 | BN973_01479 | BN973_02881 | Hydrolase. | RifB protein. | 0.753 |
CDO87128.1 | CDO89681.1 | BN973_01479 | BN973_04061 | Hydrolase. | Beta-ketoacyl synthase. | 0.828 |
CDO87128.1 | ephE | BN973_01479 | BN973_00014 | Hydrolase. | Epoxide hydrolase EphE. | 0.771 |
CDO87128.1 | fas | BN973_01479 | BN973_04186 | Hydrolase. | Fatty acid synthase Fas. | 0.761 |
CDO87128.1 | gcp | BN973_01479 | BN973_01483 | Hydrolase. | DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.860 |
CDO87128.1 | mas_2 | BN973_01479 | BN973_02186 | Hydrolase. | Multifunctional mycocerosic acid synthase membrane-associated MAS. | 0.828 |
CDO87128.1 | ppsC | BN973_01479 | BN973_02194 | Hydrolase. | Phenolpthiocerol synthesis type-I polyketide synthase PpsC. | 0.828 |
CDO87129.1 | CDO87128.1 | BN973_01480 | BN973_01479 | YjeE family ATPase. | Hydrolase. | 0.860 |
CDO87129.1 | CDO87130.1 | BN973_01480 | BN973_01481 | YjeE family ATPase. | Peptidase M22, glycoprotease. | 0.999 |
CDO87129.1 | CDO87131.1 | BN973_01480 | BN973_01482 | YjeE family ATPase. | Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.942 |
CDO87129.1 | gcp | BN973_01480 | BN973_01483 | YjeE family ATPase. | DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.999 |
CDO87130.1 | CDO87128.1 | BN973_01481 | BN973_01479 | Peptidase M22, glycoprotease. | Hydrolase. | 0.878 |
CDO87130.1 | CDO87129.1 | BN973_01481 | BN973_01480 | Peptidase M22, glycoprotease. | YjeE family ATPase. | 0.999 |
CDO87130.1 | CDO87131.1 | BN973_01481 | BN973_01482 | Peptidase M22, glycoprotease. | Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.982 |
CDO87130.1 | gcp | BN973_01481 | BN973_01483 | Peptidase M22, glycoprotease. | DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.999 |
CDO87131.1 | CDO87128.1 | BN973_01482 | BN973_01479 | Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | Hydrolase. | 0.860 |
CDO87131.1 | CDO87129.1 | BN973_01482 | BN973_01480 | Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. | YjeE family ATPase. | 0.942 |
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