STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO87276.1GntR family transcriptional regulator. (219 aa)    
Predicted Functional Partners:
CDO86165.1
GntR family transcriptional regulator.
  
     0.774
CDO88961.1
GntR family transcriptional regulator.
  
     0.774
CDO86120.1
GntR family transcriptional regulator.
  
     0.700
CDO89815.1
FadR family transcriptional regulator.
 
  
 0.679
CDO91428.1
GntR family transcriptional regulator.
 
  
 0.678
CDO91410.1
GntR family transcriptional regulator.
 
  
 0.624
CDO87277.1
Gentisate 1,2-dioxygenase.
       0.589
CDO87275.1
PPE family protein.
       0.472
CDO87278.1
Mg-chelatase subunit ChlD.
       0.460
ilvH
Acetolactate synthase 3 regulatory subunit.
   
    0.414
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.