Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CDO87671.1Putative integral membrane protein. (156 aa)    
Predicted Functional Partners:
CDO90923.1
Oxidoreductase molybdopterin-binding protein.
  
 
 0.646
emrE
EmrE.
       0.584
ctpI
CtpI.
   
  0.547
CDO89824.1
Putative metal cation transporting P-type ATPase.
   
  0.547
CDO90696.1
ctpE.
   
  0.547
CDO87192.1
Hypothetical alanine and proline rich protein.
  
     0.475
CDO87546.1
SPFH domain-containing protein/band 7 family protein.
   
 0.441
CDO88341.1
Exported conserved protein.
   
 0.441
CDO89208.1
Putative integral membrane protein.
  
     0.440
CDO88133.1
Hemerythrin HHE cation binding domain-containing protein.
  
  
  0.409
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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