STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDO90125.1Putative lumazine-binding protein. (176 aa)    
Predicted Functional Partners:
CDO86250.1
Hypothetical protein.
  
     0.731
CDO88944.1
NAD dependent epimerase/dehydratase.
  
     0.703
CDO86374.1
Hypothetical protein.
  
     0.701
CDO89047.1
SnoaL-like polyketide cyclase.
 
    0.685
CDO86457.1
Transcriptional regulator.
  
     0.684
CDO89420.1
Glyoxalase.
  
    0.684
CDO86296.1
Putative lumazine-binding protein.
 
     0.675
CDO86123.1
Hypothetical protein.
  
     0.674
CDO89158.1
Hypothetical protein.
  
     0.669
CDO89098.1
Nucleoside-diphosphate-sugar epimerase.
  
     0.667
Your Current Organism:
Mycobacterium triplex
NCBI taxonomy Id: 47839
Other names: ATCC 700071, CIP 106108, DSM 44626, JCM 14744, M. triplex
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.